14 #include "../fem/fespace.hpp" 15 #include "../fem/pfespace.hpp" 26 lagrange_tdofs(lagrange_tdofs_),
27 primary_tdofs(primary_tdofs_),
28 secondary_tdofs(secondary_tdofs_)
30 MFEM_VERIFY(lagrange_tdofs.
Size() == secondary_tdofs.
Size(),
31 "Dof sizes don't match!");
92 eliminators(eliminators_)
98 MFEM_ASSERT(vin.
Size() ==
width,
"Wrong vector size!");
99 MFEM_ASSERT(vout.
Size() ==
height,
"Wrong vector size!");
103 for (
int k = 0; k < eliminators.Size(); ++k)
116 MFEM_ASSERT(vin.
Size() ==
height,
"Wrong vector size!");
117 MFEM_ASSERT(vout.
Size() ==
width,
"Wrong vector size!");
121 for (
int k = 0; k < eliminators.Size(); ++k)
128 vout.AddElementVector(elim->
PrimaryDofs(), subvec_out);
137 for (
int i = 0; i <
height; ++i)
142 for (
int k = 0; k < eliminators.Size(); ++k)
153 mat->
Add(i, j, mat_k(iz, jz));
165 MFEM_ASSERT(rtilde.
Size() == Aop.
Height(),
"Sizes don't match!");
168 for (
int k = 0; k < eliminators.Size(); ++k)
183 MFEM_ASSERT(disp.
Size() == Aop.
Height(),
"Sizes don't match!");
186 Aop.
Mult(disp, fullrhs);
189 for (
int k = 0; k < eliminators.Size(); ++k)
229 delete explicit_projector;
230 delete h_explicit_projector;
243 "Wrong number of dofs for elimination!");
245 for (
int i = 0; i < lagrange_dofs.Size(); ++i)
247 lagrange_dofs[i] = i;
267 double * data =
B.GetData();
269 for (
int k = 0; k < constraint_rowstarts.
Size() - 1; ++k)
271 int constraint_size = constraint_rowstarts[k + 1] -
272 constraint_rowstarts[k];
278 for (
int i = constraint_rowstarts[k]; i < constraint_rowstarts[k + 1]; ++i)
280 lagrange_dofs[i - constraint_rowstarts[k]] = i;
281 for (
int jptr = I[i]; jptr < I[i + 1]; ++jptr)
284 double val = data[jptr];
285 if (std::abs(val) > 1.e-12 && secondary_dofs.
Find(j) == -1)
287 secondary_dofs[i - constraint_rowstarts[k]] = j;
293 for (
int i = constraint_rowstarts[k]; i < constraint_rowstarts[k + 1]; ++i)
295 MFEM_ASSERT(secondary_dofs[i - constraint_rowstarts[k]] >= 0,
296 "Secondary dofs don't match rows!");
297 for (
int jptr = I[i]; jptr < I[i + 1]; ++jptr)
300 if (secondary_dofs.
Find(j) == -1)
347 hA.
Mult(-1.0, rtilde, 1.0, temprhs);
384 MPI_Comm_rank(
A.GetComm(), &rank);
385 MPI_Comm_size(
A.GetComm(), &size);
387 int constraint_running_total = 0;
388 int local_constraints =
B.
Height();
389 MPI_Scan(&local_constraints, &constraint_running_total, 1, MPI_INT,
390 MPI_SUM,
A.GetComm());
391 int global_constraints = 0;
392 if (rank == size - 1) { global_constraints = constraint_running_total; }
393 MPI_Bcast(&global_constraints, 1, MPI_INT, size - 1,
A.GetComm());
397 HYPRE_BigInt row_starts[2] = { constraint_running_total - local_constraints,
398 constraint_running_total
402 row_starts, col_starts, &
B);
479 penalized_rhs += temp;
504 class IdentitySolver :
public Solver 507 IdentitySolver(
int size) :
Solver(size) { }
508 void Mult(
const Vector& x, Vector& y)
const { y = x; }
509 void SetOperator(
const Operator& op) { }
512 void SchurConstrainedSolver::Initialize()
521 tr_B =
new TransposeOperator(&
B);
535 primal_pc(&primal_pc_),
552 primal_pc(&primal_pc_),
601 if (
GetComm() != MPI_COMM_NULL)
616 const_cast<BlockDiagonalPreconditioner&>(*
block_pc));
641 h_primal_pc->SetPrintLevel(0);
644 h_primal_pc->SetSystemsOptions(
dimension, reorder);
658 schur_mat =
ParMult(scaledB, scaledBT);
662 h_dual_pc->SetPrintLevel(0);
678 void ConstrainedSolver::Initialize()
718 for (
int i = 0; i <
f.Size(); ++i)
723 for (
int i = 0; i <
B.
Height(); ++i)
730 for (
int i = 0; i <
f.Size(); ++i)
734 for (
int i = 0; i <
B.
Height(); ++i)
741 Vector& x_and_lambda)
const 758 int node,
bool parallel,
int d=0)
767 const int vdof = pfespace->
DofToVDof(node, d);
772 MFEM_ABORT(
"Asked for parallel form of serial object!");
794 std::map<int, int> dof_bconstraint;
797 std::vector<std::map<int, int> > constraints;
798 int n_bconstraints = 0;
800 for (
int att : constrained_att)
803 std::set<int> constrained_tdofs;
804 for (
int i = 0; i < fespace.
GetNBE(); ++i)
817 if (tdof >= 0) { constrained_tdofs.insert(tdof); }
823 for (
auto k : constrained_tdofs)
825 auto it = dof_bconstraint.find(k);
826 if (it == dof_bconstraint.end())
829 dof_bconstraint[k] = n_bconstraints++;
830 constraints.emplace_back();
831 constraints.back()[att] = n_rows++;
836 constraints[it->second][att] = n_rows++;
844 std::map<int, int> reorder_rows;
847 constraint_rowstarts.
Append(0);
848 for (
auto& it : dof_bconstraint)
850 int bconstraint_index = it.second;
851 bool nconstraint =
false;
852 for (
auto& att_it : constraints[bconstraint_index])
854 auto rrit = reorder_rows.find(att_it.second);
855 if (rrit == reorder_rows.end())
858 reorder_rows[att_it.second] = new_row++;
861 if (nconstraint) { constraint_rowstarts.
Append(new_row); }
863 MFEM_VERIFY(new_row == n_rows,
"Remapping failed!");
864 for (
auto& constraint_map : constraints)
866 for (
auto& it : constraint_map)
868 it.second = reorder_rows[it.second];
878 std::map<int, int> node_visits;
879 for (
int i = 0; i < fespace.
GetNBE(); ++i)
882 if (constrained_att.FindSorted(att) != -1)
890 MFEM_VERIFY(dofs.
Size() == nodes.
Size(),
891 "Something wrong in finite element space!");
893 for (
int j = 0; j < dofs.
Size(); ++j)
904 auto nv_it = node_visits.find(truek);
905 if (nv_it == node_visits.end())
907 node_visits[truek] = 1;
911 node_visits[truek]++;
913 int visits = node_visits[truek];
914 int bconstraint = dof_bconstraint[truek];
915 int row = constraints[bconstraint][att];
916 for (
int d = 0; d <
dim; ++d)
922 mout->
Add(row, inner_truek, nor[d]);
927 const double pv = mout->
SearchRow(inner_truek);
928 const double scaling = ((double) (visits - 1)) /
932 mout->
Set(row, inner_truek,
933 scaling * pv + (1.0 / visits) * nor[d]);
952 constraint_rowstarts,
true);
Abstract class for all finite elements.
virtual void MultTranspose(const Vector &x, Vector &y) const
Action of the transpose operator: y=A^t(x). The default behavior in class Operator is to generate an ...
T * HostReadWrite()
Shortcut for mfem::ReadWrite(a.GetMemory(), a.Size(), false).
Class for an integration rule - an Array of IntegrationPoint.
void Mult(const Vector &x, Vector &y) const override
Solve for given .
HypreParMatrix * penalized_mat
void Unique()
Removes duplicities from a sorted array. This requires operator== to be defined for T...
Array< int > & RowOffsets()
Return the row offsets for block starts.
SparseMatrix * ParBuildNormalConstraints(ParFiniteElementSpace &fespace, Array< int > &constrained_att, Array< int > &constraint_rowstarts)
Parallel wrapper for BuildNormalConstraints.
Solve constrained system by solving original mixed system; see ConstrainedSolver. ...
EliminationSolver(HypreParMatrix &A, SparseMatrix &B, Array< int > &primary_dofs, Array< int > &secondary_dofs)
Constructor, with explicit splitting into primary/secondary dofs.
void Mult(const Vector &x, Vector &y) const override
Operator application: y=A(x).
void Initialize(HypreParMatrix &A, HypreParMatrix &B, HypreParMatrix &D)
double GetInitialNorm() const
Returns the initial residual norm from the last call to Mult().
void RecoverMultiplier(const Vector &primalrhs, const Vector &primalvars, Vector &lm) const
virtual void Finalize(int skip_zeros=1)
Finalize the matrix initialization, switching the storage format from LIL to CSR. ...
SparseMatrix * BuildNormalConstraints(FiniteElementSpace &fespace, Array< int > &constrained_att, Array< int > &constraint_rowstarts, bool parallel)
Build a matrix constraining normal components to zero.
void SetSize(int s)
Resize the vector to size s.
double & SearchRow(const int col)
Perform a fast search for an entry in the "current row". See SetColPtr().
void Mult(const Table &A, const Table &B, Table &C)
C = A * B (as boolean matrices)
SchurConstrainedHypreSolver(MPI_Comm comm, HypreParMatrix &hA_, HypreParMatrix &hB_, Solver *prec=nullptr, int dimension=0, bool reorder=false)
int CanonicalNodeNumber(FiniteElementSpace &fespace, int node, bool parallel, int d=0)
void SetColPtr(const int row) const
Initialize the SparseMatrix for fast access to the entries of the given row which becomes the "curren...
An abstract class to solve the constrained system subject to the constraint .
int Width() const
Get the width (size of input) of the Operator. Synonym with NumCols().
virtual DofTransformation * GetBdrElementDofs(int bel, Array< int > &dofs) const
Returns indices of degrees of freedom for boundary element 'bel'. The returned indices are offsets in...
virtual void Solve(int m, int n, double *X) const
int Size() const
Returns the size of the vector.
virtual void Mult(const Vector &b, Vector &x) const
Operator application: y=A(x).
Data type dense matrix using column-major storage.
virtual void LagrangeSystemMult(const Vector &f_and_r, Vector &x_and_lambda) const
Solve for (x, lambda) given (f, r)
void ExplicitAssembly(DenseMatrix &mat) const
Return explicitly assembled in mat.
virtual void Mult(const Vector &x, Vector &y) const =0
Operator application: y=A(x).
Abstract parallel finite element space.
double * HostReadWrite()
Shortcut for mfem::ReadWrite(GetMemory(), TotalSize(), false).
const Array< int > & SecondaryDofs() const
void GetSubVector(const Array< int > &dofs, Vector &elemvect) const
Extract entries listed in dofs to the output Vector elemvect.
HypreParMatrix * h_explicit_operator
Eliminator(const SparseMatrix &B, const Array< int > &lagrange_dofs, const Array< int > &primary_tdofs, const Array< int > &secondary_tdofs)
void MultTranspose(const Vector &x, Vector &y) const override
Action of the transpose operator: y=A^t(x). The default behavior in class Operator is to generate an ...
void GetSubMatrix(const Array< int > &rows, const Array< int > &cols, DenseMatrix &subm) const
void CalcOrtho(const DenseMatrix &J, Vector &n)
HypreParMatrix * ParMult(const HypreParMatrix *A, const HypreParMatrix *B, bool own_matrix)
virtual Solver * BuildPreconditioner() const =0
Build preconditioner for penalized system.
void DeleteAll()
Delete the whole array.
Array< Eliminator * > eliminators
Operator & GetBlock(int i, int j)
Return a reference to block i,j.
double GetFinalNorm() const
Returns the final residual norm after termination of the solver during the last call to Mult()...
ConstrainedSolver(MPI_Comm comm, Operator &A_, Operator &B_)
SparseMatrix * AssembleExact() const
Assemble this projector as a (processor-local) SparseMatrix.
virtual void Mult(const Vector &f, Vector &x) const override
Solve for given .
void EliminateZeroRows()
If a row contains only zeros, set its diagonal to 1.
std::function< double(const Vector &)> f(double mass_coeff)
virtual void SetOperator(const Operator &op) override
Also calls SetOperator for the preconditioner if there is one.
void Set(const int i, const int j, const double val)
The BoomerAMG solver in hypre.
void EliminateTranspose(const Vector &in, Vector &out) const
Transpose of Eliminate(), applies .
virtual void SetPrintLevel(int print_lvl)
Legacy method to set the level of verbosity of the solver output.
double * GetData() const
Returns the matrix data array.
int Append(const T &el)
Append element 'el' to array, resize if necessary.
Perform elimination of a single constraint.
virtual IterativeSolver * BuildKrylov() const =0
Select krylov solver for penalized system.
ElementTransformation * GetBdrElementTransformation(int i) const
Returns ElementTransformation for the i-th boundary element.
void MultTranspose(const double *x, double *y) const
Multiply a vector with the transpose matrix.
int GetNumIterations() const
Returns the number of iterations taken during the last call to Mult()
int Find(const T &el) const
Return the first index where 'el' is found; return -1 if not found.
virtual ~SchurConstrainedSolver()
void SetMaxIter(int max_it)
virtual void SetConstraintRHS(const Vector &r)
Set the right-hand side r for the constraint B x = r.
void Sort()
Sorts the array in ascending order. This requires operator< to be defined for T.
void GetDiag(Vector &diag) const
Get the local diagonal of the matrix.
void RAP(const DenseMatrix &A, const DenseMatrix &P, DenseMatrix &RAP)
void Mult(const double *x, double *y) const
Matrix vector multiplication.
void AddElementVector(const Array< int > &dofs, const Vector &elemvect)
Add elements of the elemvect Vector to the entries listed in dofs. Negative dof values cause the -dof...
void BuildExplicitOperator()
Internal utility routine; assembles eliminated matrix explicitly.
void Add(const int i, const int j, const double val)
virtual ~SchurConstrainedHypreSolver()
double * GetData() const
Return a pointer to the beginning of the Vector data.
int GetVDim() const
Returns vector dimension.
MPI_Comm GetComm() const
MPI communicator.
~PenaltyConstrainedSolver()
virtual int GetTrueVSize() const
Return the number of vector true (conforming) dofs.
void LagrangeSecondary(const Vector &in, Vector &out) const
Maps Lagrange multipliers to secondary dofs, applies .
void SetAbsTol(double atol)
PrintLevel print_options
Output behavior for the iterative solver.
void SetRelTol(double rtol)
PenaltyConstrainedSolver(HypreParMatrix &A, SparseMatrix &B, double penalty_)
Abstract base class for iterative solver.
void Transpose()
(*this) = (*this)^t
Class FiniteElementSpace - responsible for providing FEM view of the mesh, mainly managing the set of...
EliminationProjection(const Operator &A, Array< Eliminator *> &eliminators)
void SetSize(int nsize)
Change the logical size of the array, keep existing entries.
bool GetConverged() const
Returns true if the last call to Mult() converged successfully.
int max_iter
Limit for the number of iterations the solver is allowed to do.
int GetLocalTDofNumber(int ldof) const
SchurConstrainedSolver(MPI_Comm comm, Operator &A_, Operator &B_, Solver &primal_pc_)
int Height() const
Get the height (size of output) of the Operator. Synonym with NumRows().
HypreParMatrix * ParAdd(const HypreParMatrix *A, const HypreParMatrix *B)
Returns the matrix A + B.
virtual Solver * BuildPreconditioner() const =0
Build preconditioner for eliminated system.
HypreParMatrix * Transpose() const
Returns the transpose of *this.
int height
Dimension of the output / number of rows in the matrix.
EliminationProjection * projector
const Array< int > & LagrangeDofs() const
double rel_tol
Relative tolerance.
void Mult(const Vector &x, Vector &y) const override
Solve for given .
void InvScaleRows(const Vector &s)
Scale the local row i by 1./s(i)
int GetBdrAttribute(int i) const
void BuildGTilde(const Vector &g, Vector >ilde) const
virtual bool Factor(int m, double TOL=0.0)
Compute the LU factorization of the current matrix.
int GetNBE() const
Returns number of boundary elements in the mesh.
constexpr int dimension
This example only works in 3D. Kernels for 2D are not implemented.
virtual void LagrangeSystemMult(const Vector &x, Vector &y) const override
Solve for (x, lambda) given (f, r)
void Eliminate(const Vector &in, Vector &out) const
virtual void SetOperator(const Operator &op)=0
Set/update the solver for the given operator.
virtual IterativeSolver * BuildKrylov() const =0
Select krylov solver for eliminated system.
int Size() const
Return the logical size of the array.
MPI_Comm GetComm() const
Return the associated MPI communicator, or MPI_COMM_NULL if no communicator is set.
int DofToVDof(int dof, int vd, int ndofs=-1) const
Compute a single vdof corresponding to the index dof and the vector index vd.
const Array< int > & PrimaryDofs() const
void MakeRef(Vector &base, int offset, int size)
Reset the Vector to be a reference to a sub-vector of base.
virtual void SetPreconditioner(Solver &pr)
This should be called before SetOperator.
BlockDiagonalPreconditioner * block_pc
void SetSize(int s)
Change the size of the DenseMatrix to s x s.
Wrapper for hypre's ParCSR matrix class.
const IntegrationRule & GetNodes() const
Get a const reference to the nodes of the element.
void GetMultiplierSolution(Vector &lambda) const
Return the Lagrange multiplier solution in lambda.
const FiniteElement * GetBE(int i) const
Returns pointer to the FiniteElement in the FiniteElementCollection associated with i'th boundary fac...
HYPRE_BigInt GetGlobalNumRows() const
Return the global number of rows.
HYPRE_Int Mult(HypreParVector &x, HypreParVector &y, double alpha=1.0, double beta=0.0) const
Computes y = alpha * A * x + beta * y.
int width
Dimension of the input / number of columns in the matrix.
void SetBlock(int iRow, int iCol, Operator *op, double c=1.0)
Add a block op in the block-entry (iblock, jblock).
double abs_tol
Absolute tolerance.
void LagrangeSecondaryTranspose(const Vector &in, Vector &out) const
Transpose of LagrangeSecondary()
void SetDiagonalBlock(int iblock, Operator *op)
Add a square block op in the block-entry (iblock, iblock).
HYPRE_BigInt * GetRowStarts() const
Return the parallel row partitioning array.